2022

  1. Silva TC, Zhang W, Young JI, Gomez L, Schmidt MA, Varma A, Chen XS, Martin ER, Wang L* (2022) Distinct sex-specific DNA methylation differences in Alzheimer's disease. Alzheimer's Research & Therapy In Press (code)
  2. Silva TC, Young JI, Zhang L, Gomez L, Schmidt MA, Varma A, Chen XS, Martin ER, Wang L* (2022) Cross-tissue analysis of blood and brain epigenome-wide association studies in Alzheimer’s disease.  Nature Communications  13: 4852 (code)
  3. Silva TC, Young JI, Martin ER, Chen XSWang L* (2022) MethReg: estimating the regulatory potential of DNA methylation in gene transcription. Nucleic Acids Research gkac030  (code) (software)
  4. Jacobsen GE FI, Quintero MA, Santander AM, Pignac-Kobinger J, Damas OM, Deshpande AR, Kerman DH, Ban Y, Gao Z, Silva TCWang L, Beecham AH, McCauley JL, Burgueño JF, Abreu MT (2022). Lamina propria phagocyte profiling reveals targetable signaling pathways in refractory inflammatory bowel disease. Gastro Hep Advances. In Press
  5. Moro A, Gao ZWang L, Yu A, Hsiung S, Ban Y, Yan A, Sologon CM, Chen XS, Malek TR (2022) Dynamic transcriptional activity and chromatin remodeling of regulatory T cells after varied duration of IL-2R signaling. Nature Immunology. In Press
  6. Moorthy BT, Jiang C, Patel DM, Ban Y, O’Shea CR, Kumar A, Yuan T, Birnbaum MD, Gomes AV, Chen XS, Fontanesi F, Lampidis TJ, Barrientos A, Zhang F (2022) The evolutionarily conserved arginyltransferase 1 mediates a pVHL-independent oxygen-sensing pathway in mammalian cells. Developmental Cell 57:5, 654-669.e9
  7. Gardner OK, Van Booven D, Wang L, Gu T, Hofmann NK, Whitehead PL, Nuytemans K, Hamilton-Nelson KL, Adams LD, Starks TD, Cuccaro ML, Martin ER, Vance JM, Bush WS, Byrd GS, Haines JL, Beecham GW, Pericak-Vance MA, Griswold AJ (2022) Genetic Architecture of RNA Editing Regulation in Alzheimer Disease across Diverse Ancestral Populations, Human Molecular Genetics, ddac075.
  8. Datta J, Bianchi A, De Castro Silva I, Despande NU, Cao LL, Mehra S, Singh S, Rafie C, Sun X, Chen X, Dai X, Colaprico A, Sharma P, Dosch AR, Pillai A, Hosein PJ, Nagathihalli NS, Komanduri KV, Wilson JM, Ban Y, Merchant NB (2022) Distinct mechanisms of innate and adaptive immune regulation underlie poor oncologic outcomes associated with KRAS-TP53 co-alteration in pancreatic cancer. Oncogene 41, 3640–3654 
  9. Edwards JS, Delabat SA, Badilla AD, DiCaprio RC, Hyun J, Burgess RA, Silva TC, Dykxhoorn DM, Chen XS, Wang L, Ishida Y, Saito T, Thomas E (2022) Downregulation of SOCS1 increases interferon-induced ISGylation during differentiation of induced-pluripotent stem cells to hepatocytes. JHEP Reports, S2589-5559(22)00164-1